Illumina Technology

User Guide

The instructions in this guide must be followed carefully in order to obtain the best possible results and to avoid any delays in processing your request. Any samples that do not comply with these recommendations may be refused without compensation.

Amplicon Library PreparationAmplicon Indexing
Genomic DNA (gDNA)Unpurified PCR product

Samples must be eluted in 10 mM Tris-HCl buffer, pH 7.5–8.5 (without EDTA) or ultrapure nuclease-free water.

Sample TypeVolumeConcentrationRecommended method for verifying concentration
gDNA10 µL of gDNA per fragment to be analyzed1 ng/µLQubit or equivalent fluorometric method.
Note: Spectrophotometric methods such as Nanodrop are much less accurate for measuring DNA concentration.  
Unpurified PCR product *20 µL **1 ng/µLQubit or equivalent fluorometric method.
Note: Spectrophotometric methods such as Nanodrop are much less accurate for measuring DNA concentration.  
* Size and integrity must have been verified by gel electrophoresis.
** If the minimum sample volume is not met, a diluent will be added to reach the required volume without prior notice
.

Samples submitted in plates that do not meet the requirements will be transferred to an accepted plate format to allow processing. Additional fees will apply.

The name written on the plate must be unique, legible, short, and identical to the one indicated on the submission form.

Samples can be arranged by row or by column. Identification must be written on one side of the plate, not on the seal, to avoid any delay in processing the request.

Recommended Adhesive FilmsRecommended 96-Well PCR Plates96-Well PCR Plates Not Accepted  
– Clear Adhesive PCR Film; Thermo Fisher Scientific, Cat# AB-0558
– Aluminum Foil for PCR and Cold Storage; VWR, Cat# 60941-074
– Tube Cap Strip of 8; Thermo Fisher Scientific, Cat#AB-0265  
Clear, fully skirted PCR plate Examples:
– Eppendorf twin.tec, Cat# 951020401
– Corning Thermowell GOLD, Cat# 3752
– Axygen 96-well PCR Microplate, Cat# PCR96FSC
– BioRad Hard-Shell 96-Well PCR Plates, skirted, Cat# HSP9601
– IST 96 well 0.2 mL Skirted PCR plate – Grey ultra-rigid frame, Cat# IST-601-096GCT
– Cell culture plate
– No-skirt PCR plates
– Half-skirt PCR plates

Click on service request and sample submission to view instructions.

Click on sample shipment preparation to view instructions.

An automated message from Nanuq is sent to the Principal Investigator (PI) and project contacts as soon as the samples are received, and again at each step of the library preparation process.

Another notification from Nanuq will be sent once sequencing data is available. 

Sequencing results are directly accessible via the Nanuq web application.

Version 2.0_2026-05-15